Zeynep Akalin Acar's Publications

Publications of Zeynep Akalin Acar

Journal Papers:

Z. Akalın-Acar, N. G. Gencer, “An advanced BEM implementation for the forward problem of Electro-Magnetic Source Imaging”, Physics in Medicine and Biology. Vol: 49, no: 5, pp: 5011-5028, 2004.
N. G. Gencer, Z. Akalın-Acar, “Use of the isolated problem approach for multi-compartment BEM models of electro-magnetic source imaging”, Physics in Medicine and Biology. Vol: 50, pp: 3007-3022, 2005.
Y Ataseven, Z. Akalin-Acar, C. E. Acar, N. G. Gencer, “Parallel implementation of the accelerated BEM approach for EMSI of the human brain”, Med. & Biol. Eng. & Comp., 2008.
Z. Akalin Acar, S. Makeig, “Neuroelectromagnetic forward head modeling toolbox”, J. of Neuroscience Methods, vol 190(2), 258-270, 2010.
A. Delorme, T. Mullen, C. Kothe, Z. Akalin Acar, N. Bigdely-Shamlo, A. Vankov, S. Makeig, “EEGLAB, SIFT, NFT, BCILAB, and ERICA: New tools for advanced EEG processing”, Comp. Intelligence and Neuroscience, vol 2011, 2011.
Z. Akalin Acar, S. Makeig, “Forward model errors in EEG source localization”, Brain Topography, in press.
Z. Akalin Acar, S. Makeig, “EEG cortical patch sources and equivalent dipole source localization”, in preparation.

Conference Papers:

C. Cao, Z. Akalin Acar, K. Kreutz-Delgado, S. Makeig, “A physiologically motivated sparse, compact, and smooth (SCS) approach to EEG source localization”, 34^th Annual International IEEE EMBS Conference, San Diego, 2012.
Z. Akalin Acar, J. Palmer, G. Worrell, S. Makeig, “Electrocortical source imaging of intracranial EEG data in epilepsy”, 33^rd Annual International IEEE EMBS Conference, Boston, 2011.
T. Mullen, Z. Akalin Acar, G. Worrell, S. Makeig, “Model Cortical Source Dynamics and Interactions During Seizure”, 33^rd Annual International IEEE EMBS Conference, Boston, 2011.
Z. Akalin Acar, G. Worrell, S. Makeig, “Patch-based cortical source localization in epilepsy”, Proc. of IEEE EMBC 2009, Minneapolis.
Z. Akalin Acar, S. Makeig, G. Worrell, “Head modeling and cortical localization in epilepsy”, Proc. of IEEE EMBC 2008, Vancouver, Canada.
Z. Akalin Acar, S. Makeig, “Neuroelectromagnetic forward modeling toolbox”, Proc. of IEEE EMBC 2008, Vancouver, Canada.
N. G. Gencer, Z. Akalın-Acar, "Use of the isolated problem approach for the multi-compartment BEM models of Electric Source Imaging", Proc. of BEM NSFI 2005, Minneapolis, USA.
Z. Akalın-Acar, N. G. Gencer, "Accelerated BEM for the Calculation of the potential and magnetic fields", Proc. of BIOMAG 2004, Boston, USA.
Z. Akalın-Acar, N. G. Gencer, "Electro-Magnetic Source Imaging with Realistic Head Models Using the Genetic Algorithms", Proc. of BIOMAG 2004, Boston, USA.
Z. Akalın-Acar, N. G. Gencer, "An Accelerated BEM Formulation for the Forward Problem Solution of ESI Using Realistic Head Models", Proc. of IEEE EMBS Conf. CD-ROM, 2003, Cancun, Mexico.
Z. Akalın, N. G. Gencer, "Investigating the Effects of Eye Conductivity on EMSI Forward Problem Using a Realistic BEM Head Model", Proc. of International Journal of Bioelectromagnetism, vol. 4, pp. 219-220, 2002, Montreal, Canada.
Z. Akalın, C. E. Acar, N. G. Gencer, "Development of Realistic Head Models for Electro-magnetic Source Imaging of the Human Brain", Proc. of IEEE EMBS Conf. CD-ROM, 2001, İstanbul, Turkey.
Z. Akalın, N. G. Gencer, "Forward Problem Solution of EMSI's with BEM Using Realistic Head Models", Biomedizinische Technik, pp: 135-137, 2001, Innsbruck, Austria.
Z. Akalın, N. G. Gencer, "Analytical Potential Solutions for ESIs Using Spheroidal Head Models", Brain-Machine Workshop, 2000, Ankara, Turkey.
Z. Akalın, B. M. Eyuboglu, "Magnetic Resonance Elastography and Inverse Problem Solution in Elasticity", Proc. of EMBC, 1999, Atlanta, USA.

Abstracts:

Z. Akalin Acar, T. Mullen, D. Groppe, A. Mehta, G. Worrell, S. Makeig, “Modeling electrocortical source dynamics of intracranial data in epilepsy”, submitted to AES, San Diego, 2012.
Z. Akalin Acar, T. Mullen, D. Groppe, G. Worrell, A. Mehta, S. Makeig, “Modeling electrocortical source dynamics in epilepsy”, mini-symposia talk at IEEE EMBS Conf., San Diego, 2012.
Z. Akalin Acar, S. Makeig, “A novel head tissue conductivity estimation method using EEG maximally independent brain sources”, Sfn, New Orleans, 2012.
Z. Akalin Acar, S. Makeig, “Error analysis for localizing cortical patch-based source activity with single dipoles”, OHBM, Beijing, 2012.
Y. Liao, Z. Akalin Acar, S. Makeig, G. Deak, “EEG imaging of toddlers during Live dyadic turn-taking: Mu-rhythm modulation and source-clusters in natural action observation and execution”, OHBM, Beijing, 2012.
Z. Akalin Acar, S. Makeig, “Forward model errors in EEG source localiztion”, ICON XI, Mallorca, 2011.
S. Makeig, J. Palmer, G. Worrell, Z. Akalin Acar, "Independent Component Analysis and Source Localization of ECoG data", ICON XI, Mallorca, 2011.
Z. Akalin Acar, J. Palmer, G. Worrell, S. Makeig, "Electrocortical source imaging of intracranial EEG data in epilepsy", Joint Symposium on Neural Computation, San Diego, June 4, 2011.
Z. Akalin Acar, S. Makeig, "Effects of head models on EEG source localization", 40th Annual meeting of the Society for Neuroscience, San Diego, CA, November 13-17, 2010.
Z. Akalin Acar, S. Makeig, “Neuroelectromagnetic Forward Modeling Toolbox”, HBM, San Francisco, June, 2009.
Z. Akalin Acar, J. Palmer, S. Makeig, “Cortical Source Localization Using Multiscale EEG data”, Sloan-Swartz meeting, Princeton, July 2008.
Z. Akalin Acar, J. Palmer, A. Gruber, G. Worrell, F. Meyer, S. Makeig, “Independent Component Analysis of Electrocorticographic Recordings of Seizure Activity”, NIPS Workshops, Whistler, December 2007.
Z. Akalin Acar, G. Worrell, S. Makeig, “Neuroelectromagnetic Head Modeling Toolbox and Realistic Head Modeling for Epilepsy Research”, NIPS Workshops, Whistler, December 2007.
Z. Akalin Acar, S. Makeig, “Realistic Modeling of the Human Head from Available Data”, HBM, Chicago, June 2007.
Z. Akalin Acar, S. Makeig, “Neuroelectromagnetic Head Modeling Toolbox and EEGLAB Module”, SfN, San Diego, November 2007.

Thesis:
Z. Akalın Acar, Electro-Magnetic Source Imaging Using Realistic Head Models, PhD Thesis, Department of Electrical and Electronics Engineering, METU, June 2005.
Z. Akalın, Imaging Elasticity with Nuclear Magnetic Resonance, MSc Thesis, Department of Electrical and Electronics Engineering, METU, September 1999.